STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT25_000158Reverse transcriptase domain-containing protein. (1266 aa)    
Predicted Functional Partners:
CVT25_014212
Uncharacterized protein.
   
 
 0.645
CVT25_008315
Uncharacterized protein.
    
   0.491
CVT25_009282
Ribosomal_L16 domain-containing protein.
   
  0.491
CVT25_008130
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
    
  0.475
CVT25_006990
Uncharacterized protein.
   
  0.473
CVT25_012818
Uncharacterized protein.
   
 
 0.470
CVT25_012824
NTP_transf_2 domain-containing protein.
   
 
 0.470
CVT25_012816
Uncharacterized protein.
   
 
 0.470
CVT25_006219
Uncharacterized protein.
   
 
 0.470
CVT25_004882
Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner.
    
  0.464
Your Current Organism:
Psilocybe cyanescens
NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481
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