STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8PF56_SERL3Uncharacterized protein. (496 aa)    
Predicted Functional Partners:
F8PFJ0_SERL3
Tr-type G domain-containing protein.
   
 0.981
F8PZY4_SERL3
JAB_MPN domain-containing protein.
   
 0.969
F8PNX6_SERL3
Nop domain-containing protein.
    
 0.965
F8PWR4_SERL3
Uncharacterized protein.
    
 0.963
F8Q726_SERL3
SNRNP27 domain-containing protein.
   
 0.962
F8Q777_SERL3
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.957
F8PJ40_SERL3
Uncharacterized protein.
   
 0.951
F8Q3S0_SERL3
WD_REPEATS_REGION domain-containing protein.
    
 0.941
F8QCN7_SERL3
TPR_REGION domain-containing protein.
    
 0.939
F8PGG6_SERL3
Small nuclear ribonucleoprotein Sm D2.
    
 0.934
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.