STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8PJ11_SERL3Uncharacterized protein. (405 aa)    
Predicted Functional Partners:
F8Q7I3_SERL3
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.604
F8PJP8_SERL3
YDG domain-containing protein.
    
  0.461
F8PYI5_SERL3
YDG domain-containing protein.
    
  0.461
F8PKN5_SERL3
Nudix hydrolase domain-containing protein.
    
  0.453
F8PQF9_SERL3
Glycoside hydrolase family 55 protein.
    
  0.453
F8PR05_SERL3
Uncharacterized protein.
    
  0.453
F8PZA4_SERL3
Uncharacterized protein.
    
  0.453
F8PZT5_SERL3
Uncharacterized protein.
    
  0.453
F8Q4R1_SERL3
Uncharacterized protein.
    
  0.453
F8Q571_SERL3
Uncharacterized membrane protein.
    
  0.453
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.