STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8PLT9_SERL3Helitron_like_N domain-containing protein. (512 aa)    
Predicted Functional Partners:
F8Q3A4_SERL3
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.567
F8Q7W6_SERL3
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
   
 
 0.498
F8Q7W7_SERL3
Uncharacterized protein.
   
 
 0.498
F8PJC4_SERL3
Uncharacterized protein.
    
 
 0.482
F8PKJ1_SERL3
PUA domain-containing protein.
   
 
  0.478
F8PXI8_SERL3
Uncharacterized protein.
  
 
 0.478
F8QFS7_SERL3
TruB_N domain-containing protein.
   
 
  0.478
F8PTJ0_SERL3
Uncharacterized protein.
    
 
 0.476
F8PTJ1_SERL3
AAA_12 domain-containing protein.
    
 
 0.476
F8PX01_SERL3
SAP domain-containing protein.
    
 
 0.474
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.