STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8PNQ5_SERL3Glyco_hydro_cc domain-containing protein. (344 aa)    
Predicted Functional Partners:
F8PJ39_SERL3
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
 0.763
F8QDN3_SERL3
Ribosomal_L2_C domain-containing protein.
   
 
 0.569
F8PMC9_SERL3
L51_S25_CI-B8 domain-containing protein.
    
   0.568
F8PUL5_SERL3
Uncharacterized protein.
    
   0.568
F8PV28_SERL3
Rab-GAP TBC domain-containing protein.
    
   0.568
F8Q5D7_SERL3
Uncharacterized protein.
    
   0.568
F8Q6B7_SERL3
Uncharacterized protein.
    
   0.568
F8Q8X8_SERL3
Uncharacterized protein.
    
   0.568
F8Q9T6_SERL3
Uncharacterized protein.
    
   0.568
F8QFP1_SERL3
Ribosomal_S5_C domain-containing protein.
    
   0.568
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
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