STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8PTC8_SERL3Uncharacterized protein. (137 aa)    
Predicted Functional Partners:
F8PKT0_SERL3
GOLD domain-containing protein.
   
 0.903
F8PZX6_SERL3
Uncharacterized protein.
   
 0.853
F8PNH0_SERL3
GOLD domain-containing protein.
    
 0.819
F8QFN7_SERL3
WW domain-containing protein.
    
 0.805
F8PIQ7_SERL3
Uncharacterized protein.
     
 0.796
F8Q1H7_SERL3
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.784
F8QEN5_SERL3
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.770
F8PLA3_SERL3
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 0.768
F8Q1D9_SERL3
Uncharacterized protein.
 
  
 
 0.763
F8PJT7_SERL3
WD_REPEATS_REGION domain-containing protein.
     
 0.753
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.