STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8Q2M6_SERL3TAFII28 domain-containing protein. (106 aa)    
Predicted Functional Partners:
F8PF50_SERL3
Uncharacterized protein.
    
 0.999
F8PNX7_SERL3
Uncharacterized protein.
   
 0.999
F8Q4Q4_SERL3
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
   
 0.999
F8Q5Q8_SERL3
DUF4211 domain-containing protein.
    
 0.999
F8Q6K9_SERL3
Uncharacterized protein.
   
 0.999
F8Q8T5_SERL3
TAF4 domain-containing protein.
    
 0.999
F8QCT4_SERL3
TAF domain-containing protein.
    
 0.999
F8QEK2_SERL3
TAFII55_N domain-containing protein.
    
 0.999
F8QGU5_SERL3
WD_REPEATS_REGION domain-containing protein.
    
 0.999
F8QIZ1_SERL3
DUF3591 domain-containing protein.
    
 0.984
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
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