STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8QC45_SERL3Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (293 aa)    
Predicted Functional Partners:
F8PY67_SERL3
PKS_AT domain-containing protein.
    
  0.866
F8PT43_SERL3
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
    
 0.766
F8QFR2_SERL3
Uncharacterized protein.
 
  
 
 0.740
F8Q2E2_SERL3
Uncharacterized protein.
  
 
0.712
F8Q2V2_SERL3
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
0.710
F8PTQ3_SERL3
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.644
F8Q6F1_SERL3
Lactamase_B domain-containing protein.
   
 0.644
F8PRK0_SERL3
Uncharacterized protein.
 
 
  0.627
F8PTA3_SERL3
Uncharacterized protein.
    
  0.617
F8QDD4_SERL3
PKS_KS domain-containing protein.
    
  0.617
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.