STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F8QK51_SERL3Reverse transcriptase domain-containing protein. (228 aa)    
Predicted Functional Partners:
F8PH06_SERL3
Integrase catalytic domain-containing protein.
 
     0.942
F8PL50_SERL3
Uncharacterized protein.
 
     0.923
F8PQA4_SERL3
Uncharacterized protein.
 
     0.918
F8PI99_SERL3
RT_RNaseH_2 domain-containing protein.
 
     0.622
F8QEK5_SERL3
Uncharacterized protein.
    
  0.609
F8PH31_SERL3
RT_RNaseH_2 domain-containing protein.
 
     0.593
F8QFG7_SERL3
ERCC4 domain-containing protein.
    
  0.526
F8PFK0_SERL3
WD_REPEATS_REGION domain-containing protein.
    
  0.517
F8QJY3_SERL3
RT_RNaseH_2 domain-containing protein.
 
     0.509
F8Q7W6_SERL3
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.504
Your Current Organism:
Serpula lacrymans
NCBI taxonomy Id: 936435
Other names: S. lacrymans var. lacrymans S7.3, Serpula lacrymans var. lacrymans S7.3
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