STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACFD1Calcium channel flower homolog isoform X1. (142 aa)    
Predicted Functional Partners:
FAM163A
Protein FAM163A.
      
 0.499
ENSEEUP00000011295
annotation not available
   
  
 0.488
KLHDC3
Kelch domain-containing protein 3 isoform X1.
      
 0.463
FAM118A
Protein FAM118A isoform X2.
      
 0.463
SESTD1
SEC14 domain and spectrin repeat-containing protein 1.
      
 0.463
KCTD10
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 isoform X2.
      
 0.453
ENSEEUP00000004366
annotation not available
      
 0.453
SHKBP1
SH3KBP1-binding protein 1.
      
 0.453
KLHDC2
Kelch domain-containing protein 2 isoform X1.
      
 0.452
RNF145
RING finger protein 145.
      
 0.447
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.