STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBLIFGastric intrinsic factor. (419 aa)    
Predicted Functional Partners:
CUBN
Cubilin.
    
 0.997
CDCP2
CUB domain-containing protein 2.
    
 0.868
PCOLCE
Procollagen C-endopeptidase enhancer 1 isoform X2.
    
 0.806
PCOLCE2
Procollagen C-endopeptidase enhancer 2.
    
 0.806
ENSEEUP00000003193
annotation not available
     
 0.707
VEGFB
Vascular endothelial growth factor B isoform X1; Belongs to the PDGF/VEGF growth factor family.
   
  
 0.691
GAST
Gastrin.
      
 0.657
UFM1
Ubiquitin-fold modifier 1; Ubiquitin-like modifier which can be covalently attached to substrate proteins as a monomer or a lysine-linked polymer in a post- translational process called ufmylation. Ufmylation on lysine residues of proteins may play a crucial role in a number of cellular processes.
      
 0.608
ENSEEUP00000013885
annotation not available
   
  
 0.600
TRABD
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
      
 0.570
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.