STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCORLLigand-dependent nuclear receptor corepressor-like protein. (517 aa)    
Predicted Functional Partners:
PLAG1
Zinc finger protein PLAG1 isoform X1.
    
 
 0.690
EZH1
Histone-lysine N-methyltransferase EZH2 isoform X4.
    
 
 0.612
SPRED1
Sprouty-related, EVH1 domain-containing protein 1.
      
 0.611
CTBP2
C-terminal-binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 
 0.583
NCAPG
Condensin complex subunit 3.
      
 0.569
ZFAT
Zinc finger protein ZFAT.
    
 
 0.563
ADNP
Activity-dependent neuroprotector homeobox protein isoform X1.
      
 0.560
GABPA
GA-binding protein alpha chain.
    
 
 0.531
ENSEEUP00000010595
annotation not available
    
 
 0.510
ENSEEUP00000001591
annotation not available
    
 
 0.504
Your Current Organism:
Erinaceus europaeus
NCBI taxonomy Id: 9365
Other names: E. europaeus, European hedgehog, common hedgehog, western European hedgehog
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