Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDK7 | ENSEEUP00000013263 | ENSEEUP00000012490 | ENSEEUP00000013263 | Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. | annotation not available | 0.923 |
CDK7 | ERCC3 | ENSEEUP00000012490 | ENSEEUP00000000948 | Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. | TFIIH basal transcription factor complex helicase XPB subunit isoform X1. | 0.982 |
CDK7 | GTF2B | ENSEEUP00000012490 | ENSEEUP00000006173 | Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. | Transcription initiation factor IIB. | 0.988 |
CDK7 | GTF2F2 | ENSEEUP00000012490 | ENSEEUP00000010099 | Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. | General transcription factor IIF subunit 2. | 0.920 |
CDK7 | POLR2A | ENSEEUP00000012490 | ENSEEUP00000001041 | Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.975 |
CDK7 | POLR2B | ENSEEUP00000012490 | ENSEEUP00000008989 | Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.934 |
CDK7 | POLR2I | ENSEEUP00000012490 | ENSEEUP00000001923 | Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.920 |
CDK7 | STON1 | ENSEEUP00000012490 | ENSEEUP00000013293 | Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. | Stonin-1; Belongs to the Stoned B family. | 0.809 |
CDK7 | TBPL1 | ENSEEUP00000012490 | ENSEEUP00000010973 | Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. | TATA box-binding protein-like protein 1. | 0.761 |
CDK7 | TBPL2 | ENSEEUP00000012490 | ENSEEUP00000007830 | Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. | TATA box-binding protein-like protein 2. | 0.914 |
ENSEEUP00000013263 | CDK7 | ENSEEUP00000013263 | ENSEEUP00000012490 | annotation not available | Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. | 0.923 |
ENSEEUP00000013263 | ERCC3 | ENSEEUP00000013263 | ENSEEUP00000000948 | annotation not available | TFIIH basal transcription factor complex helicase XPB subunit isoform X1. | 0.981 |
ENSEEUP00000013263 | GTF2B | ENSEEUP00000013263 | ENSEEUP00000006173 | annotation not available | Transcription initiation factor IIB. | 0.991 |
ENSEEUP00000013263 | GTF2F2 | ENSEEUP00000013263 | ENSEEUP00000010099 | annotation not available | General transcription factor IIF subunit 2. | 0.999 |
ENSEEUP00000013263 | POLR2A | ENSEEUP00000013263 | ENSEEUP00000001041 | annotation not available | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.979 |
ENSEEUP00000013263 | POLR2B | ENSEEUP00000013263 | ENSEEUP00000008989 | annotation not available | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.995 |
ENSEEUP00000013263 | POLR2I | ENSEEUP00000013263 | ENSEEUP00000001923 | annotation not available | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.996 |
ENSEEUP00000013263 | STON1 | ENSEEUP00000013263 | ENSEEUP00000013293 | annotation not available | Stonin-1; Belongs to the Stoned B family. | 0.981 |
ENSEEUP00000013263 | TBPL1 | ENSEEUP00000013263 | ENSEEUP00000010973 | annotation not available | TATA box-binding protein-like protein 1. | 0.944 |
ENSEEUP00000013263 | TBPL2 | ENSEEUP00000013263 | ENSEEUP00000007830 | annotation not available | TATA box-binding protein-like protein 2. | 0.972 |
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