STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHQ34518.1Membrane-bound hydrogenase subunit ehaC; PFAM: Predicted membrane protein (DUF2109); InterPro IPR019214; KEGG: mem:Memar_1173 hypothetical protein; PFAM: Protein of unknown function DUF2109, membrane; SPTR: Membrane-bound hydrogenase subunit ehaC. (79 aa)    
Predicted Functional Partners:
EHQ34519.1
Membrane-bound hydrogenase subunit ehaB; COGs: COG4041 membrane protein; KEGG: mpi:Mpet_1189 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.956
EHQ34515.1
Membrane-bound hydrogenase subunit ehaF; PFAM: Predicted membrane protein (DUF2106); COGs: COG4037 membrane protein; InterPro IPR011313; KEGG: mem:Memar_1176 hypothetical protein; PFAM: [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaF; SPTR: Membrane-bound hydrogenase subunit ehaF.
  
    0.927
EHQ34513.1
PFAM: NADH dehydrogenase I, subunit N related protein; COGs: COG4078 membrane protein; InterPro IPR017059; KEGG: mem:Memar_1178 NADH dehydrogenase I, subunit N related protein; PFAM: [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaH, predicted; SPTR: Membrane-bound hydrogenase subunit ehaH.
  
    0.916
EHQ34516.1
Membrane-bound hydrogenase subunit ehaE; PFAM: Predicted membrane protein (DUF2107); InterPro IPR011317; KEGG: mem:Memar_1175 hypothetical protein; PFAM: [NiFe]-hydrogenase-3-type complex Eha, membrane protein EhaE; SPTR: Membrane-bound hydrogenase subunit ehaE.
  
    0.916
EHQ34514.1
Membrane-bound hydrogenase subunit ehaG; PFAM: Predicted membrane protein (DUF2105); COGs: COG4036 membrane protein; InterPro IPR019212; KEGG: mem:Memar_1177 uncharacterized membrane protein; PFAM: Protein of unknown function DUF2105, membrane; SPTR: Membrane-bound hydrogenase subunit ehaG.
  
    0.903
EHQ34517.1
Protein of unknown function DUF2108, membrane; PFAM: Predicted membrane protein (DUF2108); InterPro IPR019213; KEGG: mem:Memar_1174 hypothetical protein; PFAM: Protein of unknown function DUF2108, membrane; SPTR: Membrane-bound hydrogenase subunit ehaD.
       0.897
EHQ34509.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1959); KEGG: mpi:Mpet_1199 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.882
EHQ34511.1
PFAM: NADH dehydrogenase; COGs: COG0650 Formate hydrogenlyase subunit 4; InterPro IPR001694; KEGG: mem:Memar_1180 respiratory-chain NADH dehydrogenase, subunit 1; PFAM: NADH:ubiquinone oxidoreductase, subunit 1; SPTR: Membrane-bound hydrogenase subunit ehaJ.
  
    0.870
EHQ34508.1
Membrane-bound hydrogenase subunit ehaN; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; COGs: COG3260 Ni Fe-hydrogenase III small subunit; InterPro IPR006137; KEGG: mpi:Mpet_1200 NADH ubiquinone oxidoreductase 20 kDa subunit; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; SPTR: NADH ubiquinone oxidoreductase 20 kDa subunit.
  
    0.852
EHQ34507.1
PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; Nickel-dependent hydrogenase; COGs: COG3261 Ni Fe-hydrogenase III large subunit; InterPro IPR001501:IPR001135; KEGG: mpi:Mpet_1201 NADH-ubiquinone oxidoreductase subunit 49kDa; PFAM: NADH-quinone oxidoreductase, subunit D; Nickel-dependent hydrogenase, large subunit; SPTR: NADH-ubiquinone oxidoreductase chain 49kDa.
       0.846
Your Current Organism:
Methanoplanus limicola
NCBI taxonomy Id: 937775
Other names: M. limicola DSM 2279, Methanoplanus limicola DSM 2279, Methanoplanus limicola str. DSM 2279, Methanoplanus limicola strain DSM 2279
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