STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ69042.1Arginase family hydrolase, arginase/agmainase/formiminoglutamate hydrolase; PFAM: Arginase family; TIGRFAM: agmatinase; Belongs to the arginase family. (305 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase; PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase.
  
 
 0.954
AFZ69226.1
PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.938
AFZ67934.1
N-carbamoylputrescine amidase; PFAM: Carbon-nitrogen hydrolase; TIGRFAM: N-carbamoylputrescine amidase.
  
 0.928
speA
Arginine decarboxylase, biosynthetic; Catalyzes the biosynthesis of agmatine from arginine.
  
 
 0.927
hutH
PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase.
  
  
 0.925
AFZ67935.1
Peptidylarginine deiminase-like enzyme; PFAM: Porphyromonas-type peptidyl-arginine deiminase; Belongs to the agmatine deiminase family.
    
 0.914
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.899
AFZ69039.1
PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein.
  
    0.700
AFZ69044.1
PFAM: Sodium:solute symporter family; TIGRFAM: probable sodium:solute symporter, VC_2705 subfamily; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.697
AFZ69045.1
TIGRFAM: putative solute:sodium symporter small subunit.
       0.697
Your Current Organism:
Deinococcus peraridilitoris
NCBI taxonomy Id: 937777
Other names: D. peraridilitoris DSM 19664, Deinococcus peraridilitoris DSM 19664, Deinococcus peraridilitoris KR-200, Deinococcus peraridilitoris str. DSM 19664, Deinococcus peraridilitoris strain DSM 19664
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