STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428285_00852Unannotated protein. (114 aa)    
Predicted Functional Partners:
GCA_000428285_01264
Unannotated protein.
 
 
 
 0.966
GCA_000428285_00851
Unannotated protein.
 
    0.868
GCA_000428285_01069
Unannotated protein.
    
 0.753
GCA_000428285_01325
Unannotated protein.
   
   0.692
GCA_000428285_00850
Unannotated protein.
  
    0.690
GCA_000428285_01753
Unannotated protein.
 
   
 0.563
GCA_000428285_01448
Unannotated protein.
  
 
 0.558
GCA_000428285_00619
Unannotated protein.
  
    0.516
GCA_000428285_01235
Unannotated protein.
    
  0.478
GCA_000428285_01234
Unannotated protein.
    
  0.464
Your Current Organism:
beta proteobacterium SCGC AAA027K21
NCBI taxonomy Id: 938785
Other names: b. proteobacterium SCGC AAA027-K21, beta proteobacterium SCGC AAA027-K21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.