STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIAA0195Uncharacterized protein KIAA0195 homolog (1356 aa)    
Predicted Functional Partners:
SLC25A42
Solute carrier family 25 member 42; Mitochondrial coenzyme A transporter SLC25A42
   
  
 0.747
TMEM161A
Transmembrane protein 161A; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred complete CDS: substituted 1 base at 1 genomic stop codon
      
 0.741
CASKIN2
Caskin-2
   
  
 0.721
DEPDC1B
DEP domain-containing protein 1B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 10 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
      
 0.693
INTS8
Integrator complex subunit 8; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
      
 0.693
RNF17
RING finger protein 17
      
 0.680
FIBP
Acidic fibroblast growth factor intracellular-binding protein isoform X1
    
   0.611
GPR84
G protein-coupled receptor 84; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred complete CDS: inserted 2 bases in 2 codons; substituted 2 bases at 2 genomic stop codons
      
 0.607
CAP1
Adenylyl cyclase-associated protein 1 isoform X1; Belongs to the CAP family
   
    0.543
CAP2
Adenylyl cyclase-associated protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 9 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments; Belongs to the CAP family
   
    0.543
Your Current Organism:
Pteropus alecto
NCBI taxonomy Id: 9402
Other names: P. alecto, Pteropus alecto, black flying fox
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