STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (556 aa)    
Predicted Functional Partners:
hutH
TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; KEGG: son:SO0098 histidine ammonia-lyase.
 
 0.999
hutI
TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: son:SO0095 imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
 
 0.996
ABK47724.1
PFAM: phenylalanine/histidine ammonia-lyase; KEGG: son:SO3057 Pal/histidase family protein.
 
 0.992
ABK46578.1
PFAM: phenylalanine/histidine ammonia-lyase; KEGG: son:SO4374 histidine ammonia-lyase, putative.
 
 0.990
ABK50221.1
TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO4620 fumarate reductase, flavoprotein subunit precursor.
     
 0.902
ABK46344.1
Transcriptional regulator, histidine utilization repressor, GntR family; TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: son:SO0096 histidine utilization repressor.
 
  
 0.865
ABK46264.1
PFAM: amidohydrolase; WD40 domain protein beta Propeller; KEGG: son:SO0017 hypothetical amidohydrolase.
  
  
 0.716
ABK47636.1
KEGG: son:SO3149 hypothetical protein.
  
  
 0.680
ABK47637.1
PFAM: amidohydrolase; KEGG: ilo:IL1717 secreted enzyme, contains two amidohydrolase related domains.
  
  
 0.680
ABK47622.1
PFAM: protein of unknown function DUF886; KEGG: son:SO3164 hypothetical protein.
 
  
 0.662
Your Current Organism:
Shewanella sp. ANA3
NCBI taxonomy Id: 94122
Other names: S. sp. ANA-3, Shewanella sp. ANA-3, Shewanella sp. arsenana, Shewanella trabarsenatis
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