STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tpmPFAM: thiopurine S-methyltransferase; KEGG: son:SO0582 thiopurine S-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family. (218 aa)    
Predicted Functional Partners:
ABK48055.1
PFAM: Zeta toxin family protein; KEGG: pha:PSHAa0327 hypothetical protein.
   
   0.709
ABK46818.1
KEGG: son:SO0581 hypothetical protein.
       0.517
ABK46329.1
KEGG: son:SO0079 hypothetical protein.
  
     0.481
ABK49187.1
PFAM: N-6 DNA methylase; KEGG: son:SO4265 type I restriction-modification system, M subunit.
  
 
 
 0.477
ABK48258.1
PFAM: N-6 DNA methylase; KEGG: sbo:SBO_4159 putative type I restriction enzyme M protein.
    
 
 0.408
ABK50012.1
TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: noc:Noc_2903 type I restriction-modification system M subunit.
    
 
 0.408
Your Current Organism:
Shewanella sp. ANA3
NCBI taxonomy Id: 94122
Other names: S. sp. ANA-3, Shewanella sp. ANA-3, Shewanella sp. arsenana, Shewanella trabarsenatis
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