node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK46278.1 | ABK48208.1 | Shewana3_0033 | Shewana3_1977 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.768 |
ABK46278.1 | nusA | Shewana3_0033 | Shewana3_1029 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.917 |
ABK46278.1 | rbfA | Shewana3_0033 | Shewana3_1031 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.615 |
ABK46278.1 | rimP | Shewana3_0033 | Shewana3_1028 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.662 |
ABK46278.1 | rpsO | Shewana3_0033 | Shewana3_1033 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.573 |
ABK46278.1 | truB | Shewana3_0033 | Shewana3_1032 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.913 |
ABK48208.1 | ABK46278.1 | Shewana3_1977 | Shewana3_0033 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.768 |
ABK48208.1 | ABK48260.1 | Shewana3_1977 | Shewana3_2029 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | KEGG: efa:EF2349 hypothetical protein. | 0.620 |
ABK48208.1 | guaA | Shewana3_1977 | Shewana3_1236 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.700 |
ABK48208.1 | infB | Shewana3_1977 | Shewana3_1030 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.681 |
ABK48208.1 | nusA | Shewana3_1977 | Shewana3_1029 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.910 |
ABK48208.1 | rpsO | Shewana3_1977 | Shewana3_1033 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.975 |
ABK48208.1 | truB | Shewana3_1977 | Shewana3_1032 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.808 |
ABK48260.1 | ABK48208.1 | Shewana3_2029 | Shewana3_1977 | KEGG: efa:EF2349 hypothetical protein. | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.620 |
ABK48260.1 | guaA | Shewana3_2029 | Shewana3_1236 | KEGG: efa:EF2349 hypothetical protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.633 |
ABK48260.1 | nusA | Shewana3_2029 | Shewana3_1029 | KEGG: efa:EF2349 hypothetical protein. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.831 |
ABK48260.1 | rbfA | Shewana3_2029 | Shewana3_1031 | KEGG: efa:EF2349 hypothetical protein. | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. | 0.831 |
ABK48260.1 | rimP | Shewana3_2029 | Shewana3_1028 | KEGG: efa:EF2349 hypothetical protein. | Protein of unknown function DUF150; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family. | 0.698 |
ABK48260.1 | rpsO | Shewana3_2029 | Shewana3_1033 | KEGG: efa:EF2349 hypothetical protein. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.885 |
ABK48260.1 | truB | Shewana3_2029 | Shewana3_1032 | KEGG: efa:EF2349 hypothetical protein. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.838 |