STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK47934.1PFAM: Uncharacterized conserved protein UCP029143; KEGG: son:SO1922 hypothetical protein; Belongs to the UPF0267 family. (110 aa)    
Predicted Functional Partners:
ABK47732.1
PFAM: protein of unknown function DUF1097; KEGG: son:SO3047 hypothetical protein.
  
     0.772
ABK48650.1
PFAM: protein of unknown function DUF991; KEGG: son:SO2182 hypothetical protein.
  
     0.733
ABK50062.1
PFAM: DsrE family protein; KEGG: son:SO0325 DsrE-related protein.
  
     0.635
ABK49195.1
KEGG: vpa:VP2175 putative HAAAP family transport protein.
  
     0.627
napD
NapD family protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
  
     0.612
ABK48077.1
TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; KEGG: son:SO2065 tyrosine-specific transport protein.
  
     0.598
ABK49808.1
PFAM: regulatory protein, LysR; KEGG: son:SO4020 transcriptional regulator, LysR family.
  
     0.594
ABK46354.1
PFAM: SirA family protein; KEGG: son:SO0109 hypothetical protein; Belongs to the sulfur carrier protein TusA family.
  
     0.576
ABK46353.1
PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: son:SO0108 hypothetical transporter component.
  
     0.567
ABK47418.1
PFAM: protein of unknown function DUF469; KEGG: son:SO3366 hypothetical protein.
  
     0.529
Your Current Organism:
Shewanella sp. ANA3
NCBI taxonomy Id: 94122
Other names: S. sp. ANA-3, Shewanella sp. ANA-3, Shewanella sp. arsenana, Shewanella trabarsenatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.