STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK48539.1TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: bmb:BruAb2_0185 glucose/galactose transporter. (423 aa)    
Predicted Functional Partners:
ABK48156.1
PFAM: major facilitator superfamily MFS_1; KEGG: son:SO2458 transporter, putative.
 
    0.584
ABK48540.1
PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: son:SO2213 alpha-glucosidase.
 
  
 0.574
ABK48538.1
PFAM: Fmu (Sun) domain protein; KEGG: son:SO2215 sun protein, putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
       0.475
ABK48481.1
Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: son:SO2244 transcriptional regulator, LacI family.
 
   
 0.474
ABK49346.1
Transcriptional regulator, LacI family; PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: son:SO3516 transcriptional regulator, LacI family.
 
   
 0.427
ABK48542.1
PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: pha:PSHAa1354 alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
  
  
 0.415
ABK48162.1
KEGG: son:SO2450 alpha-glucosidase.
  
     0.403
ABK46313.1
PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: ccr:CC1136 TonB-dependent receptor.
  
   
 0.401
Your Current Organism:
Shewanella sp. ANA3
NCBI taxonomy Id: 94122
Other names: S. sp. ANA-3, Shewanella sp. ANA-3, Shewanella sp. arsenana, Shewanella trabarsenatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.