STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK49131.1L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (547 aa)    
Predicted Functional Partners:
ABK49132.1
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD linked oxidase domain protein; KEGG: son:SO1521 iron-sulfur cluster-binding protein.
 
  
 0.945
ABK49134.1
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO1519 iron-sulfur cluster-binding protein.
 
  
 0.902
ABK49133.1
PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: son:SO1520 hypothetical protein.
 
  
 0.859
ABK49135.1
PFAM: protein of unknown function DUF162; KEGG: son:SO1518 hypothetical protein.
 
  
 0.818
ABK47970.1
PFAM: FAD linked oxidase domain protein; KEGG: son:SO2643 oxidoreductase, FAD-binding, putative.
  
  
 0.733
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate.
  
  
 0.619
ABK46668.1
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: son:SO0423 pyruvate dehydrogenase complex repressor.
  
  
 0.562
ABK47785.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.493
ABK48021.1
PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: son:SO2136 aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
  
 0.484
ABK47057.1
Delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
  
 0.435
Your Current Organism:
Shewanella sp. ANA3
NCBI taxonomy Id: 94122
Other names: S. sp. ANA-3, Shewanella sp. ANA-3, Shewanella sp. arsenana, Shewanella trabarsenatis
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