STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6QPX0Methyltransf_25 domain-containing protein. (563 aa)    
Predicted Functional Partners:
A0A2Z6RUU2
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 0.525
A0A2Z6RCH8
Bms1-type G domain-containing protein.
   
  0.515
A0A2Z6RA09
Uncharacterized protein.
   
  0.504
A0A2Z6SN01
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
    
  0.495
A0A2Z6QQ81
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.486
A0A2Z6RW17
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.486
A0A2Z6R680
KH domain-containing protein.
   
  0.485
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
  0.484
A0A2Z6S7L0
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.484
A0A2Z6SCB2
Uncharacterized protein.
   
  0.477
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.