STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6R3P9Uncharacterized protein. (777 aa)    
Predicted Functional Partners:
A0A2Z6SL45
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
   
 0.968
A0A2Z6SF99
E3 ubiquitin-protein ligase PEP5.
   
 0.964
A0A2Z6Q160
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.962
A0A2Z6RGG5
Pep3_Vps18 domain-containing protein.
   
 0.961
A0A2Z6RJU0
Vacuolar protein sorting-associated protein 41; Required for vacuolar assembly and vacuolar traffic. Belongs to the VPS41 family.
   
 0.959
A0A2Z6Q1S7
CNH domain-containing protein.
    
 
0.911
A0A2Z6SCD9
Vps8 domain-containing protein.
   
 
 0.873
A0A2Z6Q8K1
Uncharacterized protein.
    
 
 0.800
A0A2Z6Q5A6
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 
 0.775
A0A2Z6R7S9
DUF2263 domain-containing protein.
   
 
 0.764
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.