STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6R6W1Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (653 aa)    
Predicted Functional Partners:
A0A2Z6RRI7
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
  
 0.853
A0A2Z6R473
Uncharacterized protein.
 
  
 0.780
A0A2Z6QRU1
Pribosyltran domain-containing protein.
   
  
 0.693
A0A2Z6R352
Uncharacterized protein.
    
  0.643
A0A2Z6RUH4
Uncharacterized protein.
    
  0.643
A0A2Z6R7N3
N-acetyltransferase domain-containing protein; In the N-terminal section; belongs to the acetylglutamate kinase family.
     
 0.612
A0A2Z6S7S6
Uncharacterized protein.
 
    
 0.590
A0A2Z6QD67
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
 
      0.571
A0A2Z6QY14
Tryptophan synthase.
     
 0.562
A0A2Z6RQI7
Uncharacterized protein.
  
  
 0.549
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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