STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6R9A6Uncharacterized protein. (100 aa)    
Predicted Functional Partners:
A0A2Z6SFJ8
Uncharacterized protein.
   
   0.483
A0A2Z6R8A3
Uncharacterized protein.
    
  0.454
A0A2Z6R501
Uncharacterized protein.
   
   0.450
A0A2Z6S7B9
Uncharacterized protein.
    
  0.436
A0A2Z6RW91
Ribosomal_L2_C domain-containing protein.
   
   0.423
A0A2Z6QWV4
Ribosomal_L2_C domain-containing protein.
   
   0.420
A0A2Z6RUA8
Uncharacterized protein.
   
   0.417
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.