STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6RCM9Uncharacterized protein. (399 aa)    
Predicted Functional Partners:
A0A2Z6S7L1
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
 
 
  0.916
A0A2Z6QMC6
Uncharacterized protein.
  
 0.912
A0A2Z6QAH2
ETF domain-containing protein.
  
 0.910
A0A2Z6QJS9
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.907
A0A2Z6RY62
ETF domain-containing protein.
  
 0.902
A0A2Z6QL15
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.883
A0A2Z6RC98
Uncharacterized protein.
 
 0.877
A0A2Z6QYW3
Lipoyl-binding domain-containing protein.
   
 0.855
A0A2Z6RXV7
Uncharacterized protein.
  
 0.846
A0A2Z6RGQ7
Dihydrolipoyl dehydrogenase.
  
 
 0.834
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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