STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2Z6SHW4BTB domain-containing protein. (478 aa)    
Predicted Functional Partners:
A0A2Z6RR90
MPN domain-containing protein.
    
  0.667
A0A2Z6RQ19
PCI domain-containing protein.
    
  0.664
A0A2Z6SP40
PCI domain-containing protein.
    
  0.663
A0A2Z6RU36
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
  0.633
A0A2Z6SHW6
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
  0.633
A0A2Z6SQY5
Cullin domain-containing protein; Belongs to the cullin family.
    
  0.633
A0A2Z6S0C9
PCI domain-containing protein.
    
  0.626
A0A2Z6RUU3
RING-type domain-containing protein.
    
 0.610
A0A2Z6QTS4
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
   
 
  0.600
A0A2Z6RK47
PCI domain-containing protein.
    
  0.574
Your Current Organism:
Rhizophagus clarus
NCBI taxonomy Id: 94130
Other names: Glomus clarum, R. clarus, Rhizoglomus clarum, Rhizophagus clarus (T.H. Nicolson & N.C. Schenck) C. Walker & A. Schuessler 2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.