STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpBATP synthase subunit a; Functional Classification (COG): Energy production and conversion; Predicted KEGG Orthology: K02108. (264 aa)    
Predicted Functional Partners:
atpE
ATP synthase subunit c; Functional Classification (COG): Energy production and conversion; Predicted KEGG Orthology: K02110.
 
 0.999
atpF
ATP synthase subunit b; Functional Classification (COG): Energy production and conversion; Predicted KEGG Orthology: K02109.
  
 0.999
atpH
ATP synthase subunit delta; Functional Classification (COG): Energy production and conversion; Predicted KEGG Orthology: K02113.
 
 0.999
atpA
ATP synthase subunit alpha; Functional Classification (COG): Energy production and conversion; Predicted KEGG Orthology: K02111.
  
 0.999
atpG
ATP synthase gamma chain; Functional Classification (COG): Energy production and conversion; Predicted KEGG Orthology: K02115.
  
 0.999
atpD
ATP synthase subunit beta; Functional Classification (COG): Energy production and conversion; Predicted KEGG Orthology: K02112.
  
 0.999
atpC
ATP synthase epsilon chain; Functional Classification (COG): Energy production and conversion; Predicted KEGG Orthology: K02114.
  
 0.999
ppa
Inorganic pyrophosphatase; Functional Classification (COG): Energy production and conversion; Predicted KEGG Orthology: K01507.
  
 
 0.923
rpsB
30S ribosomal protein S2; Functional Classification (COG): Translation, ribosomal structure and biogenesis; Predicted KEGG Orthology: K02967.
  
 
 0.745
ADV34270.1
Conserved Hypothetical Protein.
       0.741
Your Current Organism:
Mycoplasma fermentans
NCBI taxonomy Id: 943945
Other names: M. fermentans M64, Mycoplasma fermentans M64, Mycoplasma fermentans str. M64, Mycoplasma fermentans strain M64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.