STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000744435_01643Unannotated protein. (321 aa)    
Predicted Functional Partners:
GCA_000744435_01646
Unannotated protein.
 
 
 0.998
GCA_000744435_01645
Unannotated protein.
 
 
 0.993
GCA_000744435_01647
Unannotated protein.
 
 
 0.991
GCA_000744435_01644
Unannotated protein.
 
 
 0.990
GCA_000744435_00437
Unannotated protein.
 
 
 0.989
GCA_000744435_00438
Unannotated protein.
  
 0.989
GCA_000744435_00439
Unannotated protein.
  
 0.979
GCA_000744435_00444
Unannotated protein.
 
  
 0.909
GCA_000744435_00048
Unannotated protein.
 
  
 0.885
GCA_000744435_00445
Unannotated protein.
 
  
 0.883
Your Current Organism:
Hippea jasoniae
NCBI taxonomy Id: 944479
Other names: DSM 24585, H. jasoniae, Hippea jasoniae Flores et al. 2012, Hippea sp. Mar08-272r, OCM 985, strain Mar08-272r
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