STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hprAPutative glycerate dehydrogenase; Protein synonym:hydroxypyruvate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (321 aa)    
Predicted Functional Partners:
TEH_11900
Putative oxidoreductase.
   
 0.938
TEH_10840
Oxidoreductase; The N-terminus of this ORF was identified by Edman sequencing; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 
0.925
garK
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
    
 0.917
garK-2
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
    
 0.917
garR
Protein synonym:tartronate semialdehyde reductase.
    
 0.911
TEH_09090
Putative phosphatase.
    
 0.906
pyk
Pyruvate kinase; The N-terminus of this ORF was identified by Edman sequencing; Belongs to the pyruvate kinase family.
 
 
 0.789
cinA
CinA-like protein; Belongs to the CinA family.
  
    0.728
TEH_12500
Putative fructose-6-phosphate aldolase.
  
 
 0.555
groES
10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
 
 
 0.549
Your Current Organism:
Tetragenococcus halophilus
NCBI taxonomy Id: 945021
Other names: T. halophilus NBRC 12172, Tetragenococcus halophilus NBRC 12172, Tetragenococcus halophilus str. NBRC 12172, Tetragenococcus halophilus strain NBRC 12172
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