STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uppSUndecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (266 aa)    
Predicted Functional Partners:
cdsA
Phosphatidate cytidylyltransferase; Protein synonym:CDP-diacylglycerol synthase; Belongs to the CDS family.
 
  
 0.992
ispA
Geranyltranstransferase; Protein synonym:farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 
 0.976
TEH_24680
Putative polyprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 
 0.941
TEH_00730
Putative polyprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 
 0.939
TEH_01040
Putative phosphatase.
  
 
 0.927
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
    
 0.915
uppP-2
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
    
 0.915
TEH_00740
Hypothetical protein.
     
  0.900
TEH_19620
Putative zinc metallopeptidase.
 
  
 0.876
TEH_04620
Phytoene synthase; Fragment.
   
 
 0.835
Your Current Organism:
Tetragenococcus halophilus
NCBI taxonomy Id: 945021
Other names: T. halophilus NBRC 12172, Tetragenococcus halophilus NBRC 12172, Tetragenococcus halophilus str. NBRC 12172, Tetragenococcus halophilus strain NBRC 12172
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