STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IALB_2466Glycosyltransferase. (306 aa)    
Predicted Functional Partners:
IALB_2467
Lipid A core-like protein.
 
    0.920
IALB_2462
Glycosyltransferase.
 
    0.838
IALB_2465
Hypothetical protein.
  
    0.790
gmd-2
GDP-D-mannose dehydratase.
  
    0.781
IALB_2468
Hypothetical protein.
  
    0.779
gmd
GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
    0.776
IALB_2076
Glycosyltransferase.
 
   0.647
wbpD
UDP-D-GlcNAc3NA acetyltransferase.
  
  
 0.626
IALB_0746
Putative glycosyltransferase.
 
  
 0.624
IALB_2451
Lipopolysaccharide synthesis sugar transferase.
 
  
 0.596
Your Current Organism:
Ignavibacterium album
NCBI taxonomy Id: 945713
Other names: Chlorobi bacterium Mat9-16, I. album JCM 16511, Ignavibacterium album JCM 16511, Ignavibacterium album Mat9-16, Ignavibacterium album str. JCM 16511, Ignavibacterium album strain JCM 16511
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