STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5A_06053Hypothetical protein. (121 aa)    
Predicted Functional Partners:
W5A_06048
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.795
W5A_06043
Thiamine biosynthesis lipoprotein apbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.785
W5A_11786
Secreted protein.
  
     0.765
W5A_03609
Hypothetical protein; COG3577 Predicted aspartyl protease.
  
     0.751
W5A_04124
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.740
W5A_03629
Hypothetical protein.
  
     0.732
W5A_10909
Hypothetical protein.
  
     0.731
W5A_00615
Hypothetical protein.
  
     0.722
W5A_01265
Hypothetical protein.
  
     0.718
W5A_08437
Hypothetical protein; COG0542 ATPases with chaperone activity, ATP-binding subunit.
  
     0.718
Your Current Organism:
Imtechella halotolerans
NCBI taxonomy Id: 946077
Other names: Flavobacterium sp. K1, I. halotolerans K1, Imtechella halotolerans K1, Imtechella halotolerans str. K1, Imtechella halotolerans strain K1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.