Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTSG_01727 | PTSG_08668 | F2TYS4 | F2UKC1 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Homocysteine methyltransferase. | 0.900 |
PTSG_01727 | PTSG_10876 | F2TYS4 | F2UR95 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Cytochrome P450 reductase. | 0.658 |
PTSG_04127 | PTSG_09582 | F2U6N6 | F2ULF0 | Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase. | Phosphoadenosine phosphosulfate reductase. | 0.997 |
PTSG_04127 | PTSG_09655 | F2U6N6 | F2ULL8 | Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase. | Sulfite reductase beta subunit. | 0.993 |
PTSG_04127 | PTSG_10768 | F2U6N6 | F2UQB5 | Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase. | Uncharacterized protein. | 0.980 |
PTSG_04127 | PTSG_10876 | F2U6N6 | F2UR95 | Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase. | Cytochrome P450 reductase. | 0.761 |
PTSG_04627 | PTSG_10876 | F2U7Z3 | F2UR95 | Uncharacterized protein; Belongs to the cytochrome P450 family. | Cytochrome P450 reductase. | 0.808 |
PTSG_06602 | PTSG_10876 | F2UFG4 | F2UR95 | Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the cytosolic Fe-S scaffold complex. Electrons are transferred from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Together with the diflavin oxidoreductase, also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RN [...] | Cytochrome P450 reductase. | 0.725 |
PTSG_08301 | PTSG_09918 | F2UJB0 | F2UNI4 | Lanosterol 14-alpha-demethylase; Belongs to the cytochrome P450 family. | Uncharacterized protein; Belongs to the cytochrome P450 family. | 0.400 |
PTSG_08301 | PTSG_10876 | F2UJB0 | F2UR95 | Lanosterol 14-alpha-demethylase; Belongs to the cytochrome P450 family. | Cytochrome P450 reductase. | 0.661 |
PTSG_08668 | PTSG_01727 | F2UKC1 | F2TYS4 | Homocysteine methyltransferase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.900 |
PTSG_08668 | PTSG_10876 | F2UKC1 | F2UR95 | Homocysteine methyltransferase. | Cytochrome P450 reductase. | 0.658 |
PTSG_09582 | PTSG_04127 | F2ULF0 | F2U6N6 | Phosphoadenosine phosphosulfate reductase. | Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase. | 0.997 |
PTSG_09582 | PTSG_09655 | F2ULF0 | F2ULL8 | Phosphoadenosine phosphosulfate reductase. | Sulfite reductase beta subunit. | 0.997 |
PTSG_09582 | PTSG_10876 | F2ULF0 | F2UR95 | Phosphoadenosine phosphosulfate reductase. | Cytochrome P450 reductase. | 0.758 |
PTSG_09655 | PTSG_04127 | F2ULL8 | F2U6N6 | Sulfite reductase beta subunit. | Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase. | 0.993 |
PTSG_09655 | PTSG_09582 | F2ULL8 | F2ULF0 | Sulfite reductase beta subunit. | Phosphoadenosine phosphosulfate reductase. | 0.997 |
PTSG_09655 | PTSG_10768 | F2ULL8 | F2UQB5 | Sulfite reductase beta subunit. | Uncharacterized protein. | 0.957 |
PTSG_09655 | PTSG_10876 | F2ULL8 | F2UR95 | Sulfite reductase beta subunit. | Cytochrome P450 reductase. | 0.917 |
PTSG_09918 | PTSG_08301 | F2UNI4 | F2UJB0 | Uncharacterized protein; Belongs to the cytochrome P450 family. | Lanosterol 14-alpha-demethylase; Belongs to the cytochrome P450 family. | 0.400 |
page 1 of 2