STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BESB_021520UBX domain-containing protein. (423 aa)    
Predicted Functional Partners:
BESB_040910
UAS domain-containing protein.
    
 
 0.999
BESB_037640
NPL4 family protein.
   
 
 0.974
BESB_047570
UBX domain-containing protein.
    
 0.965
BESB_024220
Cell division protein CDC48AP.
   
 0.942
BESB_016150
Hemimethylated DNA binding domain-containing protein.
    
 
 0.942
BESB_037270
ATPase, AAA family protein.
   
 0.942
BESB_038290
Cell division protein CDC48CY.
   
 0.942
BESB_021670
PUL domain-containing protein.
   
 
 0.937
BESB_056870
Zinc finger, C3HC4 type (RING finger) domain-containing protein.
    
 
 0.926
BESB_053560
Ubiquitin fusion degradation protein UFD1CY.
    
 
 0.892
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.