STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_07150-1Uncharacterized protein. (311 aa)    
Predicted Functional Partners:
RvY_19099-1
Uncharacterized protein.
    
 
 0.972
RvY_05253-1
WD_REPEATS_REGION domain-containing protein.
   
 
 0.964
RvY_10632-1
Uncharacterized protein.
    
 
 0.963
RvY_05032-1
Sarcolemmal membrane-associated protein.
    
 
 0.962
RvY_08517-1
Serine/threonine-protein phosphatase.
   
 
 0.954
RvY_01331-1
Uncharacterized protein.
   
 
 0.949
RvY_13540-1
Uncharacterized protein.
    
 
 0.947
RvY_17237
Uncharacterized protein.
   
 
 0.942
RvY_17376-1
Uncharacterized protein.
   
 
 0.942
RvY_17237-1
Uncharacterized protein.
   
 
 0.942
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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