STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_07469-1Uncharacterized protein. (465 aa)    
Predicted Functional Partners:
RvY_17144-1
Uncharacterized protein.
     
 0.673
RvY_12940-1
Uncharacterized protein; Belongs to the peptidase M24B family.
   
 
 0.584
RvY_14913
Uncharacterized protein.
  
     0.538
RvY_14913-3
Peptidase_M13 domain-containing protein.
  
     0.538
RvY_11949-1
Uncharacterized protein.
  
     0.537
RvY_16085-1
Uncharacterized protein.
  
     0.537
RvY_17992-1
Uncharacterized protein.
  
     0.537
RvY_02567-1
Peptidase_M13 domain-containing protein.
  
     0.534
RvY_14913-2
Peptidase_M13_N domain-containing protein.
  
     0.531
RvY_12121-1
Uncharacterized protein.
     
 0.483
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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