STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_13109-1Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family. (344 aa)    
Predicted Functional Partners:
RvY_08659-1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
     
 0.686
RvY_12167-1
Brix domain-containing protein.
   
 
 0.601
RvY_14360-1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.544
RvY_17772-1
Brix domain-containing protein.
   
    0.530
RvY_17174-1
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.503
RvY_01383-1
RRM domain-containing protein.
   
 
 0.474
RvY_02750-1
WD_REPEATS_REGION domain-containing protein.
   
  
 0.450
RvY_14631-1
Ribosomal_L18_c domain-containing protein.
    
 
 0.445
RvY_14502
Ribosomal_L18_c domain-containing protein.
    
 
 0.445
RvY_14502-1
Ribosomal_L18_c domain-containing protein.
    
 
 0.445
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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