STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_16966-3Pepdidase_M14_N domain-containing protein. (297 aa)    
Predicted Functional Partners:
RvY_06399-1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.543
RvY_12189-1
Protein kinase domain-containing protein.
    
 0.543
RvY_13128-1
Protein kinase domain-containing protein.
    
 0.543
RvY_13183-1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.543
RvY_14333-1
Mitogen-activated protein kinase.
    
 0.543
RvY_15326-1
Protein kinase domain-containing protein.
    
 0.543
RvY_16793-1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.543
RvY_12640-1
Era-type G domain-containing protein.
  
 
 0.506
RvY_02953-1
Uncharacterized protein.
     
 0.483
RvY_09873-1
Uncharacterized protein.
  
   
 0.450
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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