STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RvY_15786-1MBD domain-containing protein. (314 aa)    
Predicted Functional Partners:
RvY_07595-1
Uncharacterized protein.
    
 0.988
RvY_02307-1
Uncharacterized protein.
   
 0.982
RvY_08625-1
Uncharacterized protein.
   
 0.982
RvY_05383-1
Uncharacterized protein.
   
 0.952
RvY_07938-1
WD_REPEATS_REGION domain-containing protein.
    
 0.947
RvY_18357-1
WD_REPEATS_REGION domain-containing protein.
    
 0.947
RvY_02480-1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.886
RvY_06534-1
Uncharacterized protein.
    
 0.886
RvY_09522-1
Hist_deacetyl domain-containing protein.
    
 0.886
RvY_10869-1
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.886
Your Current Organism:
Ramazzottius varieornatus
NCBI taxonomy Id: 947166
Other names: R. varieornatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.