STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA48Spermatogenesis associated 48. (438 aa)    
Predicted Functional Partners:
THSD7A
Thrombospondin type 1 domain containing 7A.
      
 0.558
DNASE2B
Deoxyribonuclease 2 beta.
      
 0.551
PRR35
Proline rich 35.
      
 0.519
KLHDC8B
Kelch domain-containing protein 8B.
      
 0.516
RRP36
Ribosomal RNA processing 36.
      
 0.516
KBTBD12
Kelch repeat and BTB domain containing 12.
      
 0.509
TOGARAM1
TOG array regulator of axonemal microtubules 1.
      
 0.495
SIPA1L2
Signal induced proliferation associated 1 like 2.
      
 0.487
KCNG3
Potassium voltage-gated channel modifier subfamily G member 3; Belongs to the potassium channel family.
      
 0.485
RAB11FIP3
RAB11 family interacting protein 3.
      
 0.483
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.