STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRIK3Glutamate ionotropic receptor kainate type subunit 3. (919 aa)    
Predicted Functional Partners:
GRIK5
Glutamate ionotropic receptor kainate type subunit 5.
  
 
0.914
GRIK1
Glutamate ionotropic receptor kainate type subunit 1.
  
0.865
GRIK2
Glutamate ionotropic receptor kainate type subunit 2.
  
0.863
KCNG1
Potassium voltage-gated channel modifier subfamily G member 1; Belongs to the potassium channel family.
   
  
 0.656
GNGT1
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 
 0.576
DLG4
Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.
   
 0.553
DLG3
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.553
PLAC8L1
PLAC8 like 1.
      
 0.551
KCNH6
Potassium voltage-gated channel subfamily H member 6.
   
 
 0.550
BRAF
Uncharacterized protein.
    
 
 0.535
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.