STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTSBCathepsin B; Belongs to the peptidase C1 family. (367 aa)    
Predicted Functional Partners:
CSTA
Cystatin-A; Belongs to the cystatin family.
   
 0.964
CD74
CD74 molecule.
   
 0.956
CTSD
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.953
NLRP3
NLR family pyrin domain containing 3.
   
 
 0.937
BCL2L1
Bcl-2-like protein 1 isoform 1.
     
 0.909
BID
BH3-interacting domain death agonist; Counters the protective effect of Bcl-2.
   
 
 0.905
TMPRSS2
Transmembrane serine protease 2; Belongs to the peptidase S1 family.
     
 0.846
LGMN
Legumain.
   
 
 0.813
GABPB1
GA binding protein transcription factor subunit beta 1.
    
   0.763
LAMP1
Lysosomal associated membrane protein 1.
   
 
 0.758
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.