STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATS2LSpermatogenesis associated serine rich 2 like. (629 aa)    
Predicted Functional Partners:
XAF1
XIAP associated factor 1.
      
 0.573
TRIM14
Tripartite motif-containing protein 14.
      
 0.566
IFI35
Uncharacterized protein.
   
 
 0.564
DDX60
DExD/H-box helicase 60.
   
  
 0.542
FAT2
FAT atypical cadherin 2.
      
 0.532
RTP4
Receptor transporter protein 4.
      
 0.526
SLITRK5
SLIT and NTRK like family member 5.
    
 
 0.517
TMEM51
Transmembrane protein 51.
      
 0.515
FRMPD1
FERM and PDZ domain containing 1.
      
 0.515
SUB1
SUB1 regulator of transcription.
      
 0.513
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.