STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRERF1Transcriptional-regulating factor 1. (1196 aa)    
Predicted Functional Partners:
DNTTIP1
Deoxynucleotidyltransferase terminal-interacting protein 1.
    
 
 0.788
KCTD19
Potassium channel tetramerization domain containing 19.
      
 0.646
ELMSAN1
ELM2 and Myb/SANT domain containing 1.
    
 
0.563
APBB2
Amyloid beta precursor protein binding family B member 2.
      
 0.545
THAP5
THAP domain-containing protein 5 isoform 1.
  
 
   0.487
CCDC51
Coiled-coil domain-containing protein 51 isoform 1.
      
 0.483
POU2AF1
POU class 2 homeobox associating factor 1.
      
 0.476
MAP3K8
Mitogen-activated protein kinase kinase kinase 8.
      
 0.474
P2RY11
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
  
   
 0.470
TCL1A
T cell leukemia/lymphoma 1A.
      
 0.467
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.