OLFML2A protein (Callithrix jacchus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

OLFML2A

Olfactomedin like 2A. (651 aa)

Predicted Functional Partners:

SLC26A8

0.617

SLC6A13

0.584

CCKBR

0.520

PLA2G4E

0.514

OCA2

0.510

ENPP2

0.507

SLC38A2

0.501

FMOD

0.499

COL8A1

0.486

FBLN1

0.479

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCKBR	OLFML2A	ENSCJAP00000048648	ENSCJAP00000012368	Gastrin/cholecystokinin type B receptor; Belongs to the G-protein coupled receptor 1 family.	Olfactomedin like 2A.	0.520
CCKBR	SLC26A8	ENSCJAP00000048648	ENSCJAP00000029174	Gastrin/cholecystokinin type B receptor; Belongs to the G-protein coupled receptor 1 family.	Testis anion transporter 1.	0.501
CCKBR	SLC6A13	ENSCJAP00000048648	ENSCJAP00000012684	Gastrin/cholecystokinin type B receptor; Belongs to the G-protein coupled receptor 1 family.	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	0.479
COL8A1	FBLN1	ENSCJAP00000070965	ENSCJAP00000069578	Collagen alpha-1(VIII) chain.	Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.	0.449
COL8A1	OLFML2A	ENSCJAP00000070965	ENSCJAP00000012368	Collagen alpha-1(VIII) chain.	Olfactomedin like 2A.	0.486
COL8A1	SLC26A8	ENSCJAP00000070965	ENSCJAP00000029174	Collagen alpha-1(VIII) chain.	Testis anion transporter 1.	0.452
ENPP2	OLFML2A	ENSCJAP00000010541	ENSCJAP00000012368	Ectonucleotide pyrophosphatase/phosphodiesterase 2.	Olfactomedin like 2A.	0.507
ENPP2	PLA2G4E	ENSCJAP00000010541	ENSCJAP00000068564	Ectonucleotide pyrophosphatase/phosphodiesterase 2.	Phospholipase A2.	0.452
ENPP2	SLC26A8	ENSCJAP00000010541	ENSCJAP00000029174	Ectonucleotide pyrophosphatase/phosphodiesterase 2.	Testis anion transporter 1.	0.468
ENPP2	SLC6A13	ENSCJAP00000010541	ENSCJAP00000012684	Ectonucleotide pyrophosphatase/phosphodiesterase 2.	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	0.433
FBLN1	COL8A1	ENSCJAP00000069578	ENSCJAP00000070965	Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.	Collagen alpha-1(VIII) chain.	0.449
FBLN1	FMOD	ENSCJAP00000069578	ENSCJAP00000012045	Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.	Fibromodulin.	0.636
FBLN1	OLFML2A	ENSCJAP00000069578	ENSCJAP00000012368	Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.	Olfactomedin like 2A.	0.479
FBLN1	SLC26A8	ENSCJAP00000069578	ENSCJAP00000029174	Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.	Testis anion transporter 1.	0.454
FBLN1	SLC6A13	ENSCJAP00000069578	ENSCJAP00000012684	Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	0.422
FMOD	FBLN1	ENSCJAP00000012045	ENSCJAP00000069578	Fibromodulin.	Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes.	0.636
FMOD	OLFML2A	ENSCJAP00000012045	ENSCJAP00000012368	Fibromodulin.	Olfactomedin like 2A.	0.499
FMOD	SLC26A8	ENSCJAP00000012045	ENSCJAP00000029174	Fibromodulin.	Testis anion transporter 1.	0.420
OCA2	OLFML2A	ENSCJAP00000076697	ENSCJAP00000012368	OCA2 melanosomal transmembrane protein.	Olfactomedin like 2A.	0.510
OCA2	SLC26A8	ENSCJAP00000076697	ENSCJAP00000029174	OCA2 melanosomal transmembrane protein.	Testis anion transporter 1.	0.575