Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ESRRB | KLF4 | ENSCJAP00000069558 | ENSCJAP00000077416 | Estrogen related receptor beta. | Kruppel like factor 4. | 0.785 |
ESRRB | NANOG | ENSCJAP00000069558 | ENSCJAP00000035305 | Estrogen related receptor beta. | Homeobox domain-containing protein. | 0.800 |
ESRRB | POU5F1 | ENSCJAP00000069558 | ENSCJAP00000071643 | Estrogen related receptor beta. | POU-specific domain-containing protein. | 0.789 |
ESRRB | POU5F1-2 | ENSCJAP00000069558 | ENSCJAP00000036806 | Estrogen related receptor beta. | Uncharacterized protein. | 0.789 |
ESRRB | TBX3 | ENSCJAP00000069558 | ENSCJAP00000017829 | Estrogen related receptor beta. | T-box transcription factor TBX3 isoform 2. | 0.765 |
ESRRB | TFCP2L1 | ENSCJAP00000069558 | ENSCJAP00000076176 | Estrogen related receptor beta. | Transcription factor CP2 like 1. | 0.849 |
KLF4 | ESRRB | ENSCJAP00000077416 | ENSCJAP00000069558 | Kruppel like factor 4. | Estrogen related receptor beta. | 0.785 |
KLF4 | NANOG | ENSCJAP00000077416 | ENSCJAP00000035305 | Kruppel like factor 4. | Homeobox domain-containing protein. | 0.944 |
KLF4 | POU5F1 | ENSCJAP00000077416 | ENSCJAP00000071643 | Kruppel like factor 4. | POU-specific domain-containing protein. | 0.949 |
KLF4 | POU5F1-2 | ENSCJAP00000077416 | ENSCJAP00000036806 | Kruppel like factor 4. | Uncharacterized protein. | 0.949 |
KLF4 | TBX3 | ENSCJAP00000077416 | ENSCJAP00000017829 | Kruppel like factor 4. | T-box transcription factor TBX3 isoform 2. | 0.714 |
KLF4 | TFCP2L1 | ENSCJAP00000077416 | ENSCJAP00000076176 | Kruppel like factor 4. | Transcription factor CP2 like 1. | 0.659 |
MAPK1 | MAPK3 | ENSCJAP00000045173 | ENSCJAP00000058446 | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | 0.987 |
MAPK1 | TBX3 | ENSCJAP00000045173 | ENSCJAP00000017829 | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | T-box transcription factor TBX3 isoform 2. | 0.904 |
MAPK3 | MAPK1 | ENSCJAP00000058446 | ENSCJAP00000045173 | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | 0.987 |
MAPK3 | TBX3 | ENSCJAP00000058446 | ENSCJAP00000017829 | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | T-box transcription factor TBX3 isoform 2. | 0.906 |
NANOG | ESRRB | ENSCJAP00000035305 | ENSCJAP00000069558 | Homeobox domain-containing protein. | Estrogen related receptor beta. | 0.800 |
NANOG | KLF4 | ENSCJAP00000035305 | ENSCJAP00000077416 | Homeobox domain-containing protein. | Kruppel like factor 4. | 0.944 |
NANOG | POU5F1 | ENSCJAP00000035305 | ENSCJAP00000071643 | Homeobox domain-containing protein. | POU-specific domain-containing protein. | 0.977 |
NANOG | POU5F1-2 | ENSCJAP00000035305 | ENSCJAP00000036806 | Homeobox domain-containing protein. | Uncharacterized protein. | 0.977 |
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