STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EML6EMAP like 6. (1975 aa)    
Predicted Functional Partners:
MAD2L1
Mitotic arrest deficient 2 like 1.
   
 0.685
IFT140
Intraflagellar transport 140.
    
 0.658
RANBP2
RAN binding protein 2.
   
 0.654
TAF12
Transcription initiation factor TFIID subunit 12.
   
 0.620
CDC16
Cell division cycle protein 16 homolog.
   
 0.611
TAF10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.610
WDR19
WD repeat domain 19.
    
 0.597
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 0.593
TAF1
Transcription initiation factor TFIID subunit.
   
 0.590
TAF2
TATA-box binding protein associated factor 2.
    
 0.588
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.